4-5 Jul 2016 Illkirch (France)

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Program

Mon. 04 Tue. 05 List

Monday, July 4, 2016 ›

10:00

11:00

12:00

13:00

14:00

15:00

16:00

17:00

18:00

19:00

20:00

21:00

›10:00 (15min)

Welcome

10:00 - 10:15 (15min)

Welcome

›10:15 (2h)

Epigenomics – “linear”

10:15 - 12:15 (2h)

Epigenomics – “linear”

› WBS: a computational pipeline for the treatment of whole-genome high-throughput bisulfite sequencing data - Eric Bonnet, Centre National de Génotypage 10:15-10:45 (30min)

› Investigating transcription factor binding using DNase-seq datasets - Anaïs Bardet, Friedrich Miescher Institute for Biomedical Research 10:45-11:15 (30min)

› Efficiency and the quality of methylation calls of RRBS and WGBS pipelines - Yassen Assenov, Division of Epigenomics and Cancer Risk Factors, German Cancer Research Center 11:15-11:45 (30min)

› DeepBlue: Diving into Epigenomic Data - Felipe Albrecht, Max Planck Institute for Informatics 11:45-12:15 (30min)

›12:15 (1h15)

Lunch

12:15 - 13:30 (1h15)

Lunch

›13:30 (2h)

Epigenomics – “3D”

13:30 - 15:30 (2h)

Epigenomics – “3D”

› Long-range chromatin interaction mapping: From quality assessment to the implementation solutions for the analysis of temporal 3D-chromatin reorganization - Matthias Blum, Institut de Génétique et de Biologie Moléculaire et Cellulaire 13:30-14:00 (30min)

› Challenges of analyzing Hi-C data - Fidel Ramirez, The Max Planck Institute of Immunobiology and Epigenetics 14:00-14:30 (30min)

› Chromosome conformation dynamics during T cell development - yousra ben zouari, Institut de Génétique et de Biologie Moléculaire et Cellulaire 14:30-15:00 (30min)

› DeepTools2: A flexible platform for deep-sequencing data analysis and exploration. - Devon Ryan, Max Planck Institute of Immunobiology and Epigenetics 15:00-15:30 (30min)

›15:30 (30min)

Coffee break

15:30 - 16:00 (30min)

Coffee break

›16:00 (2h)

Cohort analyses

16:00 - 18:00 (2h)

Cohort analyses

› Comparative genomics and transcriptomics of several gene families in Vitis genus - Camille Rustenholz, Santé de la Vigne et Qualité du Vin 16:00-16:30 (30min)

› On the implications of cohort-based variation analysis as a new paradigm in cancer genomics - Lars Feuerbach, Deutsches Krebsforschungszentrum 16:30-17:00 (30min)

› The 1002 yeast genomes project: Exploring the genotype-phenotype relationship of Saccharomyces cerevisiae - Jackson Peter, Génétique moléculaire, génomique, microbiologie - Joseph Schacherer, Génétique moléculaire, génomique, microbiologie 17:00-17:30 (30min)

› How can you trust your metagenetics analysis pipeline ? - Léa SIEGWALD, PEGASE-Biosciences, Centre de Recherche en Informatique, Signal et Automatique de Lille, Centre d'infection et d'immunité de Lille, Gènes Diffusion 17:30-18:00 (30min)

›18:30 (3h)

Dinner

18:30 - 21:30 (3h)

Dinner

Session

Speech

Logistics

Break

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