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10:00 - 10:15
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Welcome |
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10:15 - 12:15
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Epigenomics – “linear” |
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| 10:15 - 10:45 |
› WBS: a computational pipeline for the treatment of whole-genome high-throughput bisulfite sequencing data - Eric Bonnet, Centre National de Génotypage |
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| 10:45 - 11:15 |
› Investigating transcription factor binding using DNase-seq datasets - Anaïs Bardet, Friedrich Miescher Institute for Biomedical Research |
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| 11:15 - 11:45 |
› Efficiency and the quality of methylation calls of RRBS and WGBS pipelines - Yassen Assenov, Division of Epigenomics and Cancer Risk Factors, German Cancer Research Center |
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| 11:45 - 12:15 |
› DeepBlue: Diving into Epigenomic Data - Felipe Albrecht, Max Planck Institute for Informatics |
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12:15 - 13:30
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Lunch |
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13:30 - 15:30
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Epigenomics – “3D” |
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| 13:30 - 14:00 |
› Long-range chromatin interaction mapping: From quality assessment to the implementation solutions for the analysis of temporal 3D-chromatin reorganization - Matthias Blum, Institut de Génétique et de Biologie Moléculaire et Cellulaire |
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| 14:00 - 14:30 |
› Challenges of analyzing Hi-C data - Fidel Ramirez, The Max Planck Institute of Immunobiology and Epigenetics |
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| 14:30 - 15:00 |
› Chromosome conformation dynamics during T cell development - yousra ben zouari, Institut de Génétique et de Biologie Moléculaire et Cellulaire |
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| 15:00 - 15:30 |
› DeepTools2: A flexible platform for deep-sequencing data analysis and exploration. - Devon Ryan, Max Planck Institute of Immunobiology and Epigenetics |
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15:30 - 16:00
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Coffee break |
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16:00 - 18:00
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Cohort analyses |
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| 16:00 - 16:30 |
› Comparative genomics and transcriptomics of several gene families in Vitis genus - Camille Rustenholz, Santé de la Vigne et Qualité du Vin |
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| 16:30 - 17:00 |
› On the implications of cohort-based variation analysis as a new paradigm in cancer genomics - Lars Feuerbach, Deutsches Krebsforschungszentrum |
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| 17:00 - 17:30 |
› The 1002 yeast genomes project: Exploring the genotype-phenotype relationship of Saccharomyces cerevisiae - Jackson Peter, Génétique moléculaire, génomique, microbiologie - Joseph Schacherer, Génétique moléculaire, génomique, microbiologie |
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| 17:30 - 18:00 |
› How can you trust your metagenetics analysis pipeline ? - Léa SIEGWALD, PEGASE-Biosciences, Centre de Recherche en Informatique, Signal et Automatique de Lille, Centre d'infection et d'immunité de Lille, Gènes Diffusion |
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18:30 - 21:30
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Dinner |
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